vg
tools for working with variation graphs
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Here is a list of all enums with links to the classes they belong to:
A
B
C
E
F
G
I
K
M
O
P
R
S
T
V
- a -
anno_type_t :
vg::multipath_alignment_t
- b -
build_mode :
GBWTConfig
- c -
code_type_t :
vg::ZipCode
- e -
Edit :
vg::WFAAlignment
- f -
FilterName :
vg::Counts
Format :
ChainsConfig
- g -
graph_type :
GraphHandler
- i -
index_type :
vg::GBWTHandler
- k -
key_type :
vg::GAFSorterRecord
kmer_presence :
vg::Recombinator
- m -
matrix_t :
vg::BandedGlobalAligner< IntType >
merge_mode :
GBWTConfig
MutableGraphImplementation :
vg::IndexingParameters
- o -
OperatingMode :
HaplotypesConfig
Order :
vg::StreamSorter< Message >
order :
ReferenceInterval
output_format_t :
vg::MultipathAlignmentEmitter
- p -
PairType :
vg::MinimizerMapper
path_cover_mode :
GBWTConfig
PayloadType :
vg::MinimizerIndexParameters
preset_t :
vg::Recombinator::Parameters
Problem :
vg::AlignmentValidity
- r -
RecurseType :
vg::GraphCaller
RescueAlgorithm :
vg::MinimizerMapper
- s -
scoring_model_t :
vg::Recombinator::Parameters
SpliceStrand :
vg::MultipathMapper
State :
vg::Funnel
,
vg::ZipCodeTree::distance_iterator
subchain_t :
vg::Haplotypes::Subchain
- t -
TraversalAlg :
vg::Genotyper
tree_item_type_t :
vg::ZipCodeTree
- v -
Verbosity :
vg::Haplotypes
,
vg::IndexingParameters
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1.17.0